In the Amazin S3 installation video it shows the link being displayed on the subscribers profile page / control panel. Can that be disabled so that the link is placed where I want it in my site? Links to videos on the video page, links to PDFs on the PDF page, things like that?
You need to edit your your content at aMember CP -> Protect Content and enable option 'Hide (do not display this item link in members area)' in content settings.